Team Science Projects

Cell Types & Learning

We are combining longitudinal in vivo calcium imaging with spatial transcriptomics to investigate how specific cell types restructure their activity during novelty processing and task learning.

Dynamic Routing

We are studying task-switching behaviors in mice to determine how the brain controls the flow of its own activity and how neuronal circuits are reconfigured to dynamically route information for different tasks.

OpenScope

OpenScope provides access to cutting-edge neurophysiological methods to scientists across the world. Similar to astronomical observatories, scientists propose experiments that are then executed at the Allen Institute.

Single-Cell Computation

Our goal is to investigate the computations performed by individual neurons, based on measuring synaptic input and firing output. We are developing technologies with single synapse resolution in the living brain. New microscopes allow tracking synaptic activity across the entire dendritic arbor.

Brain-Wide Neuromodulation

We are studying the molecular and anatomical subclasses of neuromodulator neurons and exploring how networks use neuromodulators to drive learning and decision making.

Credit Assignment During Learning

We are using optical connection-mapping techniques and brain computer interface (BCI) in the context of a learning task to ask how the brain updates its synapses to support behavioral learning without interfering with existing skills or memories.

Data platforms accelerate our work

Surgery

The Surgery team offers a variety of aseptic rodent surgical procedures ranging from stereotaxic injections to headpost implantation and cranial windowing.

Neuropixels Electrophysiology

The Neuropixels platform uses pioneering technology for highly reproducible, targeted, brain-wide, cell-type-specific electrophysiology to record neural activity from defined neuron types across the brain.

Brain-Wide Anatomy At Cellular Resolution

The Molecular Anatomy platform combines innovative histology, imaging, and analysis techniques to map the morphology and molecular identity of neuron types across the whole brain.

Fiber Photometry

The Fiber Photometry platform enables optical measurement of neural activity in live animals to study neural circuits' function and dynamics in behaving animals.

Behavior

The Behavior platform uses advanced technology to implement a standardized, modular, multi-task virtual reality gymnasium for mice, with the goal to study brain function across different behaviors at scale.